dacapo.experiments.datasplits.datasets.arrays.crop_array_config

Classes

CropArrayConfig

This config class provides the necessary configuration for cropping an

Module Contents

class dacapo.experiments.datasplits.datasets.arrays.crop_array_config.CropArrayConfig

This config class provides the necessary configuration for cropping an Array to a smaller ROI. Especially useful for validation volumes that may be too large for quick evaluation. The ROI is specified in the config. The cropped Array will have the same dtype as the source Array.

source_array_config

The Array to crop

Type:: ArrayConfig

roi

The ROI for cropping

Type:: Roi

from_toml(cls, toml_path: str) -> CropArrayConfig: Load the CropArrayConfig from a TOML file

to_toml(self, toml_path: str) -> None: Save the CropArrayConfig to a TOML file

create_array(self) → CropArray: Create the CropArray from the config

Note

This class is a subclass of ArrayConfig and inherits all its attributes and methods. The only difference is that the array_type is CropArray.

array_type

source_array_config: dacapo.experiments.datasplits.datasets.arrays.array_config.ArrayConfig

roi: funlib.geometry.Roi