dacapo.experiments.datasplits.datasets.arrays.concat_array

Module Contents

Classes

ConcatArray

This is a wrapper around other source_arrays that concatenates

Attributes

logger

dacapo.experiments.datasplits.datasets.arrays.concat_array.logger
class dacapo.experiments.datasplits.datasets.arrays.concat_array.ConcatArray(array_config)

This is a wrapper around other source_arrays that concatenates them along the channel dimension.

property attrs

Return a dictionary of metadata attributes stored on this array.

property source_arrays: Dict[str, dacapo.experiments.datasplits.datasets.arrays.array.Array]
property source_array: dacapo.experiments.datasplits.datasets.arrays.array.Array
property axes

Returns the axes of this dataset as a string of charactes, as they are indexed. Permitted characters are:

  • zyx for spatial dimensions

  • c for channels

  • s for samples

property dims

Returns the number of spatial dimensions.

property voxel_size

The size of a voxel in physical units.

property roi

The total ROI of this array, in world units.

property writable: bool

Can we write to this Array?

property data

Get a numpy like readable and writable view into this array.

property dtype

The dtype of this array, in numpy dtypes

property num_channels

The number of channels provided by this dataset. Should return None if the channel dimension doesn’t exist.