`dacapo.experiments.datasplits.datasets.arrays.tiff_array`

Module Contents

Classes

This is a tiff array

Attributes

dacapo.experiments.datasplits.datasets.arrays.tiff_array.logger

class dacapo.experiments.datasplits.datasets.arrays.tiff_array.TiffArray(array_config)

This is a tiff array

abstract property attrs: Return a dictionary of metadata attributes stored on this array.

property axes: List[str]

Returns the axes of this dataset as a string of charactes, as they are indexed. Permitted characters are:

zyx for spatial dimensions

c for channels

s for samples

property dims: int: Returns the number of spatial dimensions.

property writable: bool: Can we write to this Array?

property dtype: The dtype of this array, in numpy dtypes

property num_channels: int | None: The number of channels provided by this dataset. Should return None if the channel dimension doesn’t exist.

property spatial_axes: List[str]

shape() → funlib.geometry.Coordinate

voxel_size() → funlib.geometry.Coordinate: The size of a voxel in physical units.

roi() → funlib.geometry.Roi: The total ROI of this array, in world units.

data(): Get a numpy like readable and writable view into this array.