`dacapo.store.mongo_stats_store`

Module Contents

Classes

MongoStatsStore

A MongoDB store for run statistics. Used to store and retrieve training

Attributes

dacapo.store.mongo_stats_store.logger

class dacapo.store.mongo_stats_store.MongoStatsStore(db_host, db_name)

A MongoDB store for run statistics. Used to store and retrieve training statistics and validation scores.

store_training_stats(run_name: str, stats: dacapo.experiments.TrainingStats): Store training stats of a given run.

retrieve_training_stats(run_name: str, subsample: bool = False) → dacapo.experiments.TrainingStats: Retrieve the training stats for a given run.

store_validation_iteration_scores(run_name: str, scores: dacapo.experiments.ValidationScores): Store the validation iteration scores of a given run.

retrieve_validation_iteration_scores(run_name: str, subsample: bool = False, validation_interval: int | None = None) → List[dacapo.experiments.ValidationIterationScores]: Retrieve the validation iteration scores for a given run.

delete_validation_scores(run_name: str) → None

delete_training_stats(run_name: str) → None